| 11 :02x01 - Heading Out to Sea (Mar/28/2006) | | The second season begins by examining new rules and regulations that attempt to set safer standards for the crab-fishing industry, but the potential for injury and disaster remains high on the stormy, frigid Bering Sea, as captains now have months instead of days to make their quota. | |
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| 12 :02x02 - Batten Down the Hatches (Apr/04/2006) | | The crab-fishing fleet enjoys rare calm weather on the Bering Sea in October, but the forecast calls for a storm and the decision to stay or run must be made. | |
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| 13 :02x03 - On the Crab (Apr/11/2006) | | Despite a raging storm, the crab-fishing fleet persists is going after Alaskan king crab. | |
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| 14 :02x04 - The Finish Line (Apr/18/2006) | | Capt. Sig Hansen and the crew of the Northwestern make a profit on Akutan Island with their last catch, and proceed back out for more Alaskan king crab. | |
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| 15 :02x05 - Friends and Rivals (Apr/25/2006) | | A storm creates a rogue wave that takes the ship and crew by surprise, stalling the engines and knocking out the navigation equipment. | |
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| 17 :02x07 - Smoke on the Water (May/09/2006) | | An arctic storm roils the seas in the crab grounds, and fishing becomes perilous for the Rollo and the Maverick. Meanwhile, the Cornelia Marie sits in port for a third day. | |
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| 18 :02x08 - Man vs. Ice (May/16/2006) | | Long hours and short catches make the crews of the Maverick and Rollo short-tempered; the Time Bandit heads north into the storm; the Northwestern goes off course. | |
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| 19 :02x09 - On the Edge (May/23/2006) | | The Rollo perseveres through bad weather; the crew of the Maverick suffer a ship-wide flu epidemic; the Cornelia Marie can't find any crab. | |
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| 20 :02x10 - Pribilof Stare (May/30/2006) | | Freezing weather and ice take out a deckhand on the Cornelia Marie; the Time Bandit negotiates the ice pack; a broken brace on the Maverick is jury-rigged by the crew. | |
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| 21 :02x11 - Race Against the Ice (Jun/06/2006) | | The Rollo and the Maverick head back to the crab grounds after off-loading lots of product on St. Paul Island, but the Rollo's captain is angry with his crew due to a miscalculation. | |
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| 22 :02x12 - Cashing In (Jun/13/2006) | | The fleet scrambles to catch as much product as possible and get safely back to port. | |
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